Publications

A protocol for a living mapping review of global research funding for infectious diseases with a pandemic potential – Pandemic PACT

Seminog O. et al, (2024), Wellcome Open Research, 9, 156 - 156

Genomic epidemiology and longitudinal sampling of ward wastewater environments and patients reveals complexity of the transmission dynamics of blaKPC-carbapenemase-producing Enterobacterales in a hospital setting.

Stoesser N. et al, (2024), JAC-antimicrobial resistance, 6

Oligomerization-driven avidity correlates with SARS-CoV-2 cellular binding and inhibition.

Asor R. et al, (2024), Proceedings of the National Academy of Sciences of the United States of America, 121

Temperature and Sex Ratios at Birth

Abdel Ghany J. et al, (2024)

Early NK-cell and T-cell dysfunction marks progression to severe dengue in patients with obesity and healthy weight

Gregorova M. et al, (2024)

Higher dose corticosteroids in hospitalised COVID-19 patients requiring ventilatory support (RECOVERY): a randomised, controlled, open-label, platform trial

Horby PW. et al, (2024)

Developing a novel approach to complex evolution of antimicrobial resistance via mobile genetic elements from a persistent environmental biofilm

Mathers A. et al, (2024)

Changes to the UK childhood immunisation schedule.

Akeju O. et al, (2024), Archives of disease in childhood

CliqueFluxNet: Unveiling EHR Insights with Stochastic Edge Fluxing and Maximal Clique Utilisation Using Graph Neural Networks

Molaei S. et al, (2024), Journal of Healthcare Informatics Research, 8, 555 - 575

Double testing with lateral flow antigen test devices for COVID-19: does a second test in quick succession add value?

Futschik ME. et al, (2024), Journal of Virological Methods, 329

Ethical issues in Nipah virus control and research: addressing a neglected disease

Johnson T. et al, (2024), Journal of Medical Ethics, 50, 612 - 617

Examining liminality in professional practice, relational identities, and career prospects in resource-constrained health systems: Findings from an empirical study of medical and nurse interns in Kenya

Zhao Y. et al, (2024), Social Science & Medicine, 357, 117226 - 117226

Global burden of bacterial antimicrobial resistance 1990–2021: a systematic analysis with forecasts to 2050

Naghavi M. et al, (2024), The Lancet

Power and positionality in the practice of health system responsiveness at sub-national level: insights from the Kenyan coast.

Kagwanja N. et al, (2024), International journal for equity in health, 23

Prevalence, risk factors, and impact of long COVID in a socially vulnerable community in Brazil: a prospective cohort study

Azambuja P. et al, (2024), The Lancet Regional Health - Americas, 37

Social capital mediates knowledge gaps in informing sexual and reproductive health behaviours across Africa

Koebe T. et al, (2024), Social Science & Medicine, 357, 117159 - 117159

The Virulence of Otherness

Paterson A., (2024), Annals of Internal Medicine, 177, 1284 - 1284

Bioethics and the value of disagreement.

Parker MJ., (2024), J Med Ethics

Health and economic impacts of Lassa vaccination campaigns in West Africa

Smith DRM. et al, (2024), Nature Medicine

Structural insights into Frizzled3 through nanobody modulators.

Hillier J. et al, (2024), Nat Commun, 15

Why Was the Azithromycin “for Life” Trial Necessary?

Maitland K. and Walker AS., (2024), New England Journal of Medicine, 391, 760 - 762

Epidemiology and excess mortality of antimicrobial resistance in bacteraemias among cancer patients: a cohort study using routinely collected health data from regional hospital trusts in Oxford and Oslo, 2008-2018

Danielsen AS. et al, (2024)

Group sequential designs for clinical trials when the maximum sample size is uncertain.

Yarahmadi A. et al, (2024), Stat Med

A human model of Buruli ulcer: Provisional protocol for a Mycobacterium ulcerans controlled human infection study.

Muhi S. et al, (2024), Wellcome Open Research, 9, 488 - 488

Mapping subnational gender gaps in internet and mobile adoption using social media data

Breen C. et al, (2024)

Predicting rifampicin resistance inM. tuberculosisusing machine learning informed by protein structural and chemical features

Lynch CI. et al, (2024)

Midlife health in Britain and the United States: a comparison of two nationally representative cohorts

Bridger Staatz C. et al, (2024), International Journal of Epidemiology, 53

Transformers and large language models are efficient feature extractors for electronic health record studies

Yuan K. et al, (2024)

Quantitative drug susceptibility testing for Mycobacterium tuberculosis using unassembled sequencing data and machine learning

(2024), PLOS Computational Biology, 20, e1012260 - e1012260

'Bloodstream infection': A valuable concept we should keep in our toolbox.

Danielsen AS. et al, (2024), The Journal of infection, 89

Anti-SARS-CoV-2 antibody dynamics after primary vaccination with two-dose inactivated whole-virus vaccine, heterologous mRNA-1273 vaccine booster, and Omicron breakthrough infection in Indonesian health care workers.

Suwarti S. et al, (2024), BMC infectious diseases, 24

Concerted deletions eliminate a neutralizing supersite in SARS-CoV-2 BA.2.87.1 spike.

Duyvesteyn HME. et al, (2024), Structure (London, England : 1993)

Dissemination and persistence of antimicrobial resistance (AMR) along the wastewater-river continuum.

Read DS. et al, (2024), Water research, 264

Genome-wide Association Study of Susceptibility to Respiratory Syncytial Virus Hospitalization in Young Children <5 Years of age.

Egeskov-Cavling AM. et al, (2024), The Journal of infectious diseases, 230, e333 - e341

High-resolution epidemiological landscape from ~290,000 SARS-CoV-2 genomes from Denmark.

Khurana MP. et al, (2024), Nature communications, 15

Infection Inspection: using the power of citizen science for image-based prediction of antibiotic resistance in Escherichia coli treated with ciprofloxacin.

Farrar A. et al, (2024), Scientific reports, 14

Presentation and outcomes of Lassa fever in children in Nigeria: a prospective cohort study (LASCOPE).

Duvignaud A. et al, (2024), Journal of the Pediatric Infectious Diseases Society

The effect of pH on the structure of Bluetongue virus VP5.

Zhang H. et al, (2024), The Journal of general virology, 105

Vaccine Platform Comparison: Protective Efficacy against Lethal Marburg Virus Challenge in the Hamster Model.

O'Donnell KL. et al, (2024), International journal of molecular sciences, 25

Ecology and environment predict spatially stratified risk of highly pathogenic avian influenza in wild birds across Europe

Hayes S. et al, (2024)

Geographical distribution, disease association and diversity of Klebsiella pneumoniae K/L and O antigens in India: roadmap for vaccine development

Shamanna V. et al, (2024), Microbial Genomics, 10

Large and unequal life expectancy declines during the COVID-19 pandemic in India in 2020

Gupta A. et al, (2024), Science Advances, 10

Enduring maternal brain changes and their role in mediating motherhood’s impact on well-being

Rotondi V. et al, (2024), Scientific Reports, 14

The impact of different antimicrobial exposures on the gut microbiome in the ARMORD observational study

Peto L. et al, (2024)

The impact of different antimicrobial exposures on the gut microbiome in the ARMORD observational study

Peto L. et al, (2024)

Computational mining of B cell receptor repertoires reveals antigen-specific and convergent responses to Ebola vaccination

Richardson E. et al, (2024), Frontiers in Immunology, 15

Improved estimates of COVID-19 correlates of protection, antibody decay and vaccine efficacy waning: a joint modelling approach

Phillips DJ. et al, (2024)

An open-label, randomized, non-inferiority trial of the efficacy and safety of ciprofloxacin versus an aminoglycoside + ciprofloxacin in the treatment of bubonic plague (IMASOY): study protocol for a randomized control trial-an update to the published protocol.

Randremanana RV. et al, (2024), Trials, 25

At-admission prediction of mortality and pulmonary embolism in an international cohort of hospitalised patients with COVID-19 using statistical and machine learning methods.

Mesinovic M. et al, (2024), Scientific reports, 14

Characterising the molecular epidemiology of human parechovirus in young infants in the UK and Canada.

Kadambari S. et al, (2024), Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 174

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Publications