Publications

Routes of importation and spatial dynamics of SARS-CoV-2 variants during localised interventions in Chile

Gutierrez B. et al, (2024)

Ancient chicken remains reveal the origins of virulence in Marek's disease virus.

Fiddaman SR. et al, (2023), Science (New York, N.Y.), 382, 1276 - 1281

Genetic diversity, recombination and cross-species transmission of a waterbird gammacoronavirus in the wild

François S. et al, (2023), Journal of General Virology, 104

Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1

Tsui JL-H. et al, (2023), Science, 381, 336 - 343

Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern.

Tegally H. et al, (2023), Cell, 186, 3277 - 3290.e16

The evolutionary history of hepaciviruses.

Li YQ. et al, (2023), bioRxiv

Identification of evolutionary trajectories shared across human betacoronaviruses.

Escalera-Zamudio M. et al, (2023), Genome biology and evolution

Investigation of hospital discharge cases and SARS-CoV-2 introduction into Lothian care homes

Cotton S. et al, (2023), Journal of Hospital Infection, 135, 28 - 36

Trends and spatiotemporal patterns of arboviral spread in Mexico and Central America

Gutierrez B. et al, (2023)

Bidirectional movement of emerging H5N8 avian influenza viruses between Europe and Asia via migratory birds since early 2020.

Zhang G. et al, (2023), Mol Biol Evol

Estimating epidemic dynamics with genomic and time series data

Zarebski A. et al, (2023)

Genetic diversity, recombination and cross-species transmission of a waterbird gammacoronavirus in the wild

François S. et al, (2023)

Implementation of genomic surveillance of SARS-CoV-2 in the Caribbean: Lessons learned for sustainability in resource-limited settings.

Sahadeo NSD. et al, (2023), PLOS global public health, 3

Seasonal dynamics of the wild rodent faecal virome

Raghwani J. et al, (2022), Molecular Ecology

Global disparities in SARS-CoV-2 genomic surveillance.

Brito AF. et al, (2022), Nature communications, 13

Impact of host age on viral and bacterial communities in a waterbird population

Hill SC. et al, (2022), The ISME Journal

Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus.

Happi C. et al, (2022), PLoS biology, 20

Recurrent SARS-CoV-2 mutations in immunodeficient patients.

Wilkinson SAJ. et al, (2022), Virus evolution, 8

Spatial growth rate of emerging SARS-CoV-2 lineages in England, September 2020-December 2021.

Smallman-Raynor MR. et al, (2022), Epidemiology and infection, 150

Pango lineage designation and assignment using SARS-CoV-2 spike gene nucleotide sequences.

O'Toole Á. et al, (2022), BMC genomics, 23

Evolutionary features of a prolific subtype of avian influenza A virus in European waterfowl.

Wille M. et al, (2022), Virus evolution, 8

Mapping environmental suitability of Haemagogus and Sabethes spp. mosquitoes to understand sylvatic transmission risk of yellow fever virus in Brazil.

Li SL. et al, (2022), PLoS neglected tropical diseases, 16

The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK (vol 8, veac080, 2022)

Hill V. et al, (2022), VIRUS EVOLUTION, 8

The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UK.

Hill V. et al, (2022), Virus Evol, 8

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Publications